mia_processes.pipelines.reports package

Pipelines used in the reports generation.

Submodules

mia_processes.pipelines.reports.bold_iqms module

The pipeline dedicated to the IQMs extraction for functional IRM data.

class mia_processes.pipelines.reports.bold_iqms.Bold_iqms(autoexport_nodes_parameters=None, **kwargs)[source]

Bases: Pipeline

Extraction of IQMs

Please, see the complete documentation for the Bold_iqms brick in the mia_processes website

Note

  • Type ‘Bold_iqms.help()’ for a full description of this process parameters.

  • Type ‘<Bold_iqms>.get_input_spec()’ for a full description of this process input trait types.

  • Type ‘<Bold_iqms>.get_output_spec()’ for a full description of this process output trait types.

pipeline_definition()[source]

Building the pipeline

mia_processes.pipelines.reports.extract_roi_param module

blabla.

The purpose of this module is to blabla.

Contains:
Class:

  • Extract_roi_param

class mia_processes.pipelines.reports.extract_roi_param.Extract_roi_param(autoexport_nodes_parameters=None, **kwargs)[source]

Bases: Pipeline

Produces gray matter masks for various ROIs and means, standard deviations, laterality indexes for beta and spmT values in these ROIs

Please, see the complete documentation for the Extract_roi_param brick in the mia_processes website

Note

  • Type ‘Extract_roi_param.help()’ for a full description of this process parameters.

  • Type ‘<Extract_roi_param>.get_input_spec()’ for a full description of this process input trait types.

  • Type ‘<Extract_roi_param>.get_output_spec()’ for a full description of this process output trait types.

pipeline_definition()[source]

Building the pipeline