mia_processes.pipelines.qualityControl package¶
The pipelines dedicated to the quality control measurement.
Submodules¶
mia_processes.pipelines.qualityControl.anat_mriqc module¶
The atomic calculations from afni.
- class mia_processes.pipelines.qualityControl.anat_mriqc.Anat_mriqc(autoexport_nodes_parameters=None, **kwargs)[source]¶
Bases:
Pipeline
Get no-reference IQMs (image quality metrics) from structural (T1w and T2w) data using mriqc anatomical workflow (mriqc v22.06)
Please, see the complete documentation for the Anat_mriqc_pipeline brick in the mia_processes website
Note
Type ‘Anat_mriqc.help()’ for a full description of this process parameters.
Type ‘<Anat_mriqc>.get_input_spec()’ for a full description of this process input trait types.
Type ‘<Anat_mriqc>.get_output_spec()’ for a full description of this process output trait types.
mia_processes.pipelines.qualityControl.bold_mriqc module¶
The MRIQC pipeline for functional MRI data.
- class mia_processes.pipelines.qualityControl.bold_mriqc.Bold_mriqc(autoexport_nodes_parameters=None, **kwargs)[source]¶
Bases:
Pipeline
Get no-reference IQMs (image quality metrics) from functional MRI data using mriqc functional workflow (mriqc v22.06)
Please, see the complete documentation for the Bold_mriqc brick in the mia_processes website
Note
Type ‘Bold_mriqc.help()’ for a full description of this process parameters.
Type ‘<Bold_mriqc>.get_input_spec()’ for a full description of this process input trait types.
Type ‘<Bold_mriqc>.get_output_spec()’ for a full description of this process output trait types.