FramewiseDisplacement brick¶
Calculate the FD (framewise displacement) as in [Power2012]¶
This implementation reproduces the calculation in fsl_motion_outliers.
Adapted from nipype Cofunds
Mandatory inputs parameters:
- in_file (a string representing an existing file)
Motion parameters file.
ex. '/home/username/data/derived_data/reg_func_valid_oned.txt'
Optional inputs with default value parameters:
- normalize (a boolean, optional, default value is False)
Calculate FD in mm/s.
ex. False
- out_prefix (a string, optional, default value is ‘fd’)
Specify the string to be prepended to the filename of the output file.
ex. 'fd_'
- parameter_source (a string which is FSL or AFNI or SPM or FSFAST or NIPY’, optional, default value is FSL)
Source of movement parameters.
ex. FSL
- radius (a float, optionnal, default value is 50.0)
Radius in mm to calculate angular FDs.
ex. 50.0
Outputs parameters:
- out_file (a strings representing a file)
Out file.
ex. '/home/username/data/derived_data/fd_reg_func_valid_oned.out'
Usefull links: