Resample2 brick¶
Sets images to the resolution of a reference image using using nilearn.image.resample_to_img()¶
The “PatientName_data/ROI_data/convROI_BOLD2” directory is created to receive the resampling results from the runtime. If this directory exists at runtime, it is deleted.
To work correctly, the database entry for the reference_image parameter must have the PatientName tag filled in.
Mandatory inputs parameters:
- files_to_resample
The images that will be resampled (a list of pathlike object or string representing a file or a list of items which are a pathlike object or string representing a file ; valid extensions: [.img, .nii, .hdr]).
ex. ['/home/username/data/raw_data/convACA_L.nii', '/home/username/data/raw_data/convACA_R.nii', '/home/username/data/raw_data/convACM_L.nii', '/home/username/data/raw_data/convACM_R.nii']
- reference_image
The reference image for resampling (a string representing an existing file ; valid extensions: [.nii, .nii.gz]).
ex. '/home/username/data/raw_data/template.nii'
- suffix
Suffix of output images (a string, default value is ‘_2’).
ex. _2
Outputs parameters:
- out_images
The resampled images (a list of pathlike object or string representing a file or a list of items which are a pathlike object or string representing a file ; valid extensions: [.nii, .nii.gz]).
ex. ['/home/username/data/derived_data/patient-name_data/ROI_data/convROI_BOLD2/convACA_L_2.nii', '/home/username/data/derived_data/patient-name_data/ROI_data/convROI_BOLD2/convACA_R_2.nii', '/home/username/data/derived_data/patient-name_data/ROI_data/convROI_BOLD2/convACM_L_2.nii', '/home/username/data/derived_data/patient-name_data/ROI_data/convROI_BOLD2/convACM_R_2.nii']
Useful links: